STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolG_7Inositol 2-dehydrogenase. (340 aa)    
Predicted Functional Partners:
AQT69458.1
Hypothetical protein.
       0.777
tuaH
Putative teichuronic acid biosynthesis glycosyltransferase TuaH.
  
    0.652
capA
Capsule biosynthesis protein CapA.
       0.645
wbbL
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
       0.610
AQT69454.1
Phenylacetate-coenzyme A ligase.
       0.608
AQT69464.1
Tetratricopeptide repeat protein.
       0.592
ywqD_1
Tyrosine-protein kinase YwqD.
       0.590
AQT69459.1
Oligosaccharide biosynthesis protein Alg14 like protein.
       0.582
AQT69460.1
Hypothetical protein; Glycosyltransferase family 28 C-terminal domain.
       0.581
AQT69461.1
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
       0.581
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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