STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqD_1Tyrosine-protein kinase YwqD. (739 aa)    
Predicted Functional Partners:
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.997
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.985
AQT69467.1
Polysaccharide export protein Wza.
 
 
 0.978
AQT68319.1
Polysaccharide export protein Wza.
 
 
 0.962
AQT69697.1
Vi polysaccharide export protein VexA.
  
 
 0.950
epsL
Putative sugar transferase EpsL.
 
  
 0.938
ywqE
Tyrosine-protein phosphatase YwqE.
 
  
 0.885
AQT69464.1
Tetratricopeptide repeat protein.
 
     0.862
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
  
 0.839
AQT69460.1
Hypothetical protein; Glycosyltransferase family 28 C-terminal domain.
 
   
 0.824
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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