STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT69573.1Pilus assembly protein, PilO. (178 aa)    
Predicted Functional Partners:
epsE_3
Type II traffic warden ATPase.
  
 
 0.755
AQT69575.1
Type IV pilus assembly protein PilM.
  
 
 0.741
AQT69574.1
Hypothetical protein.
       0.671
AQT69572.1
Hypothetical protein.
       0.664
pilT_4
Twitching mobility protein.
  
  
 0.653
pilQ_2
Type IV pilus biogenesis and competence protein PilQ precursor.
 
 
 0.644
epsF_4
General secretion pathway protein F.
   
 
 0.578
AQT69568.1
Tfp pilus assembly protein PilV.
     
 0.516
AQT69681.1
Hypothetical protein.
  
     0.515
AQT68061.1
Putative neuraminidase (sialidase).
  
     0.508
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.