STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yicI_2Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family. (1079 aa)    
Predicted Functional Partners:
bglX_1
Periplasmic beta-glucosidase precursor.
 
  
 0.938
bglX_2
Periplasmic beta-glucosidase precursor.
 
  
 0.933
yicI_1
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.930
treS
Trehalose synthase/amylase TreS.
  
 
 0.914
rafA_2
Alpha-galactosidase.
 
  
0.910
malQ
4-alpha-glucanotransferase.
    
 0.910
hldE_1
Bifunctional protein HldE.
   
 
 0.903
agaA_1
Alpha-galactosidase A precursor.
    
 0.902
agaA_2
Alpha-galactosidase A precursor.
    
 0.902
agaA_3
Alpha-galactosidase A precursor.
    
0.902
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.