STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT69810.1Pectate lyase superfamily protein. (1463 aa)    
Predicted Functional Partners:
AQT69806.1
Beta-phosphoglucomutase family hydrolase.
 
    0.788
AQT69118.1
Hypothetical protein.
 
     0.776
AQT69700.1
Tetratricopeptide repeat protein.
  
     0.772
AQT68718.1
Thermophilic serine proteinase precursor; Belongs to the peptidase S8 family.
  
     0.754
AQT69697.1
Vi polysaccharide export protein VexA.
 
     0.750
AQT70332.1
Putative acetyltransferase.
  
     0.749
AQT69707.1
Hypothetical protein.
  
     0.724
AQT70344.1
Putative membrane protein.
  
     0.723
AQT67186.1
Outer membrane assembly lipoprotein YfiO.
 
     0.721
AQT67116.1
Hypothetical protein.
  
     0.717
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.