Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQT69000.1 | AQT69825.1 | STSP2_02178 | STSP2_03023 | Putative FAD-linked oxidoreductase. | HIT-like protein. | 0.401 |
| AQT69149.1 | AQT69825.1 | STSP2_02336 | STSP2_03023 | Tetratricopeptide repeat protein. | HIT-like protein. | 0.408 |
| AQT69149.1 | rpoA_2 | STSP2_02336 | STSP2_03025 | Tetratricopeptide repeat protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.416 |
| AQT69825.1 | AQT69000.1 | STSP2_03023 | STSP2_02178 | HIT-like protein. | Putative FAD-linked oxidoreductase. | 0.401 |
| AQT69825.1 | AQT69149.1 | STSP2_03023 | STSP2_02336 | HIT-like protein. | Tetratricopeptide repeat protein. | 0.408 |
| AQT69825.1 | map | STSP2_03023 | STSP2_03030 | HIT-like protein. | Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.454 |
| AQT69825.1 | nifJ | STSP2_03023 | STSP2_02890 | HIT-like protein. | Pyruvate-flavodoxin oxidoreductase. | 0.488 |
| AQT69825.1 | rplQ | STSP2_03023 | STSP2_03024 | HIT-like protein. | 50S ribosomal protein L17. | 0.736 |
| AQT69825.1 | rpoA_2 | STSP2_03023 | STSP2_03025 | HIT-like protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.567 |
| AQT69825.1 | rpsM | STSP2_03023 | STSP2_03028 | HIT-like protein. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.596 |
| AQT69825.1 | serS | STSP2_03023 | STSP2_02009 | HIT-like protein. | Serine--tRNA ligase. | 0.486 |
| AQT69825.1 | trxB | STSP2_03023 | STSP2_00403 | HIT-like protein. | Thioredoxin reductase. | 0.519 |
| map | AQT69825.1 | STSP2_03030 | STSP2_03023 | Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | HIT-like protein. | 0.454 |
| map | rplQ | STSP2_03030 | STSP2_03024 | Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 50S ribosomal protein L17. | 0.798 |
| map | rpoA_2 | STSP2_03030 | STSP2_03025 | Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.768 |
| map | rpsM | STSP2_03030 | STSP2_03028 | Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.988 |
| nifJ | AQT69825.1 | STSP2_02890 | STSP2_03023 | Pyruvate-flavodoxin oxidoreductase. | HIT-like protein. | 0.488 |
| nifJ | trxB | STSP2_02890 | STSP2_00403 | Pyruvate-flavodoxin oxidoreductase. | Thioredoxin reductase. | 0.466 |
| rplQ | AQT69825.1 | STSP2_03024 | STSP2_03023 | 50S ribosomal protein L17. | HIT-like protein. | 0.736 |
| rplQ | map | STSP2_03024 | STSP2_03030 | 50S ribosomal protein L17. | Methionine aminopeptidase 1; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.798 |
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