STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degP1Putative periplasmic serine endoprotease DegP-like precursor. (360 aa)    
Predicted Functional Partners:
htrA
Putative serine protease HtrA.
  
     0.629
AQT68140.1
Hypothetical protein.
  
     0.541
kdgR
Transcriptional regulator KdgR.
  
    0.456
AQT68033.1
Hypothetical protein.
  
    0.443
yteR
Unsaturated rhamnogalacturonyl hydrolase YteR.
       0.443
AQT67008.1
Cyclic 3',5'-adenosine monophosphate phosphodiesterase.
  
 
   0.428
AQT69803.1
Hypothetical protein.
  
     0.427
AQT69815.1
Calcineurin-like phosphoesterase.
  
 
   0.408
kduD
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
  
 0.405
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
  
    0.401
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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