STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBCopper-exporting P-type ATPase B. (680 aa)    
Predicted Functional Partners:
AQT68448.1
Zinc/cadmium/mercury/lead-transporting ATPase.
  
 
 0.880
AQT70128.1
Hypothetical protein.
       0.675
AQT70129.1
Putative zinc metalloprotease; Belongs to the peptidase M50B family.
     
 0.636
copA
Copper resistance protein A precursor.
 
  
 0.490
pgsA2_2
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.474
czcD
Cadmium, cobalt and zinc/H(+)-K(+) antiporter.
 
  
 0.447
aseR
HTH-type transcriptional repressor AseR.
 
  
 0.433
fieF
Ferrous-iron efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.431
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.420
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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