STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT70136.1Photosynthetic reaction center H subunit. (247 aa)    
Predicted Functional Partners:
osmY
Osmotically-inducible protein Y precursor.
 
  
 0.811
AQT67285.1
Bacterial membrane flanked domain protein.
  
    0.689
AQT70128.1
Hypothetical protein.
  
    0.611
AQT70138.1
Exodeoxyribonuclease III (xth).
 
   
 0.606
AQT67514.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
 
  
 0.591
pdhD_2
Dihydrolipoyl dehydrogenase.
       0.566
polX
DNA polymerase/3'-5' exonuclease PolX.
       0.552
AQT70140.1
Oligosaccharide amylase.
 
     0.547
yraA
Putative cysteine protease YraA.
  
  
 0.527
AQT68385.1
Anti-anti-sigma factor.
   
  
 0.510
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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