STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT70138.1Exodeoxyribonuclease III (xth). (781 aa)    
Predicted Functional Partners:
AQT70140.1
Oligosaccharide amylase.
 
     0.928
mgtA
GDP-mannose-dependent alpha-mannosyltransferase.
 
   
 0.849
yraA
Putative cysteine protease YraA.
  
    0.714
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
   0.641
AQT70136.1
Photosynthetic reaction center H subunit.
 
   
 0.606
osmY
Osmotically-inducible protein Y precursor.
  
    0.537
AQT68450.1
Putative glycosyl hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.525
polX
DNA polymerase/3'-5' exonuclease PolX.
 
    0.497
otsA
Trehalose-phosphate synthase.
  
  
 0.491
AQT68099.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.