STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgtAGDP-mannose-dependent alpha-mannosyltransferase. (423 aa)    
Predicted Functional Partners:
AQT70140.1
Oligosaccharide amylase.
 
     0.935
dagK
Diacylglycerol kinase.
   
 
 0.902
AQT70138.1
Exodeoxyribonuclease III (xth).
 
   
 0.849
yraA
Putative cysteine protease YraA.
  
    0.670
osmY
Osmotically-inducible protein Y precursor.
  
    0.501
tuaD_2
UDP-glucose 6-dehydrogenase TuaD.
 
  
 0.429
AQT70136.1
Photosynthetic reaction center H subunit.
  
    0.422
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.406
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.