STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimB_4GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase. (397 aa)    
Predicted Functional Partners:
tuaC_2
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
     0.952
tuaC_1
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
  
0.879
AQT70332.1
Putative acetyltransferase.
     
 0.778
AQT70334.1
Hypothetical protein.
       0.773
epsK_2
Putative membrane protein EpsK.
 
  
 0.650
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.619
wbpA_2
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.601
AQT70337.1
Hypothetical protein.
       0.592
tuaD_2
UDP-glucose 6-dehydrogenase TuaD.
  
  
 0.587
strE_2
dTDP-glucose 4,6-dehydratase.
 
    0.564
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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