STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176885_03309Unannotated protein. (380 aa)    
Predicted Functional Partners:
GCA_900176885_03307
Unannotated protein.
 
 
 0.979
GCA_900176885_03310
Unannotated protein.
 
   
 0.875
GCA_900176885_03306
Unannotated protein.
 
     0.837
GCA_900176885_02965
Unannotated protein.
 
 
 0.752
GCA_900176885_02158
Unannotated protein.
 
 
 0.704
GCA_900176885_02161
Unannotated protein.
 
 
 0.703
GCA_900176885_03308
Unannotated protein.
 
    
0.642
GCA_900176885_03316
Unannotated protein.
 
  
  0.581
GCA_900176885_03089
Unannotated protein.
  
  
 0.572
GCA_900176885_01529
Unannotated protein.
  
     0.562
Your Current Organism:
Oceanobacillus senegalensis
NCBI taxonomy Id: 1936063
Other names: CSUR P3587, O. senegalensis, Oceanobacillus sp. Marseille-P3587, strain Marseille-P3587
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.