STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY10575.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (451 aa)    
Predicted Functional Partners:
APY10574.1
Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.773
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.773
APY10577.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
APY10570.1
MmcQ-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
APY10571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
APY10572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
APY10573.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
APY10578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
APY10579.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.566
APY10569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.454
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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