STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY10584.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
APY10585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.972
APY12478.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.845
APY12637.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.812
APY11739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.803
APY11738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
APY10324.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
APY12635.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
APY10975.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.697
APY10976.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
APY10241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.652
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.