STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY10637.1Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
APY10214.1
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.872
APY11050.1
DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.871
BWZ22_13590
DNA-binding response regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.831
APY11117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.
 
    0.708
APY10638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
APY11082.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.672
APY11472.1
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.645
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.605
APY10390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.
  
    0.603
APY10485.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.603
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.