STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY11008.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
APY11007.1
Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.842
APY11006.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.820
APY11004.1
Glycosyltransferase family 1 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.817
APY11005.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.794
APY12400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.562
BWZ22_14805
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.510
APY09987.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.485
APY09994.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.471
APY09991.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.467
BWZ22_07005
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.