STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY11250.1Cell surface protein SprA; Derived by automated computational analysis using gene prediction method: Protein Homology. (2404 aa)    
Predicted Functional Partners:
APY10545.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
APY12711.1
DUF5103 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.991
APY10297.1
Gliding motility lipoprotein GldK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.880
APY10296.1
Gliding motility protein GldL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.862
ruvA
Holliday junction branch migration protein RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
  
 0.841
APY11020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.839
APY10295.1
Gliding motility protein GldM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.838
APY11893.1
PorT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.829
APY12757.1
Gliding motility lipoprotein GldJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.817
APY10294.1
Gliding motility protein GldN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.816
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.