STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY11583.1Gliding motility-associated ABC transporter ATP-binding subunit GldA; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
APY11584.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.978
APY11585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.940
APY12333.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.937
APY12867.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.937
APY09913.1
Gliding motility-associated ABC transporter permease subunit GldF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.909
APY11586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.650
APY10737.1
Nitrous oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.569
APY12758.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.566
APY10739.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.561
APY10735.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.515
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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