STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY11600.1Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)    
Predicted Functional Partners:
APY11601.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
   0.781
APY11599.1
Family 88 glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.618
APY11860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.588
APY11596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.497
APY11648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.493
APY11862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.491
APY11662.1
Glucuronyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.481
APY11595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.478
APY11593.1
DUF5060 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.476
APY11592.1
Acetylglucosamine-6-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.473
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.