STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY12427.1DNA topoisomerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
APY11198.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
APY12435.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
APY12426.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.745
APY11754.1
N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
APY12359.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
APY12850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
APY12294.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.723
APY12259.1
Ribonuclease Z; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
APY11990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
APY11012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
Your Current Organism:
Seonamhaeicola sp. S23
NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.