STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000498095_02366Unannotated protein. (92 aa)    
Predicted Functional Partners:
GCA_000498095_01713
Unannotated protein.
     
 0.687
GCA_000498095_00080
Unannotated protein.
     
 0.666
GCA_000498095_01430
Unannotated protein.
    
 0.654
GCA_000498095_02269
Unannotated protein.
    
 0.654
GCA_000498095_04185
Unannotated protein.
    
 0.654
GCA_000498095_00489
Unannotated protein.
     
 0.640
GCA_000498095_03728
Unannotated protein.
     
 0.640
GCA_000498095_00309
Unannotated protein.
    
  0.637
GCA_000498095_00496
Unannotated protein.
    
  0.637
GCA_000498095_01302
Unannotated protein.
    
  0.637
Your Current Organism:
Pseudoalteromonas sp. TB64
NCBI taxonomy Id: 1938600
Other names: P. sp. TB64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.