STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000498095_04533Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000498095_01186
Unannotated protein.
   
 0.879
GCA_000498095_00659
Unannotated protein.
   
 0.874
GCA_000498095_03596
Unannotated protein.
   
 0.853
GCA_000498095_04535
Unannotated protein.
  
     0.774
GCA_000498095_03446
Unannotated protein.
 
 
 0.749
GCA_000498095_01291
Unannotated protein.
  
     0.745
GCA_000498095_03645
Unannotated protein.
  
  
  0.734
GCA_000498095_00488
Unannotated protein.
  
     0.718
GCA_000498095_04522
Unannotated protein.
  
     0.718
GCA_000498095_00229
Unannotated protein.
   
 0.712
Your Current Organism:
Pseudoalteromonas sp. TB64
NCBI taxonomy Id: 1938600
Other names: P. sp. TB64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.