STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR62581.1Amylo-alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (715 aa)    
Predicted Functional Partners:
AQR62580.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
AQR62858.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.817
AQR61113.1
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.569
AQR63547.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.568
glk
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.
    
  0.565
AQR60883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.541
AQR63588.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.495
AQR63340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.494
AQR61168.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.490
AQR60511.1
Adenosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.480
Your Current Organism:
Brevundimonas sp. LM2
NCBI taxonomy Id: 1938605
Other names: B. sp. LM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.