STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG28767.1Prophage maintenance system killer protein. (177 aa)    
Predicted Functional Partners:
SMG16064.1
Virulence protein RhuM family protein.
     0.974
SMG31161.1
Virulence protein RhuM family protein.
     0.974
SMG12209.1
Virulence protein RhuM family protein.
     0.973
SMG16098.1
Uncharacterized conserved protein.
     0.958
SMG28759.1
Major paralogous domain-containing protein.
 
     0.800
SMG28941.1
5-(carboxyamino)imidazole ribonucleotide mutase.
    
  0.702
SMG15237.1
Adenylosuccinate lyase.
    
  0.700
SMG28785.1
Glutamine synthetase.
       0.497
SMG28744.1
Hypothetical protein.
       0.494
SMG28750.1
Protein of unknown function.
       0.494
Your Current Organism:
Fibrobacter sp. UWB15
NCBI taxonomy Id: 1938898
Other names: F. sp. UWB15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.