STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG38285.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (335 aa)    
Predicted Functional Partners:
SMG22148.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
  0.887
SMG34972.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  
  0.885
SMG28321.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  
  0.869
SMG22172.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.860
SMG33621.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
  0.856
SMG19916.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
  0.853
SMG06988.1
Phospholipid transport system substrate-binding protein.
 
 0.847
SMG16780.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
   
  0.833
SMG16790.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
 0.833
SMG19909.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
 0.833
Your Current Organism:
Fibrobacter sp. UWB15
NCBI taxonomy Id: 1938898
Other names: F. sp. UWB15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.