STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ10332.1Hypothetical protein. (707 aa)    
Predicted Functional Partners:
AQQ10331.1
Hypothetical protein.
      
0.586
carQ
RNA polymerase sigma factor CarQ; Belongs to the sigma-70 factor family. ECF subfamily.
   
   0.575
AQQ10334.1
FecR protein.
       0.535
isp
Intracellular serine protease.
  
 
 0.458
AQQ10335.1
Hypothetical protein.
       0.428
Your Current Organism:
Sedimentisphaera cyanobacteriorum
NCBI taxonomy Id: 1940790
Other names: DSM 27091, JCM 19196, KCTC 15598, Phycisphaerae bacterium L21-RPul-D3, S. cyanobacteriorum, Sedimentisphaera cyanobacteriorum Spring et al. 2018, bacterium L21-RPul-D3, strain L21-RPul-D3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.