STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARN56224.1Transposase; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ. (407 aa)    
Predicted Functional Partners:
ARN56162.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.598
ARN56158.1
PA14 domain protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.590
ARN55854.1
Type I phosphodiesterase / nucleotide pyrophosphatase; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.558
ARN56544.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.551
ARN56159.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.511
ARN56543.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.477
ARN56221.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
       0.442
ARN56222.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
       0.442
ARN56223.1
DNA binding domain, excisionase family; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
       0.442
ARN57644.1
Hypothetical protein; Bacteria and source DNA available from Stefan Spring, Leibniz Insitute DSMZ.
  
     0.439
Your Current Organism:
Sedimentisphaera salicampi
NCBI taxonomy Id: 1941349
Other names: DSM 101733, JCM 31929, KCTC 15597, Phycisphaerae bacterium SM-PulAB-D3, Phycisphaerae bacterium ST-PulAB-D4, S. salicampi, Sedimentisphaera salicampi Spring et al. 2018, bacterium SM-PulAB-D3, bacterium ST-PulAB-D4, strain ST-PulAB-D4
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