ENSACUP00000000064 protein (Athene cunicularia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACUP00000000064

NADH dehydrogenase [ubiquinone] 1 subunit C2-like. (125 aa)

Predicted Functional Partners:

NDUFA6

0.999

NDUFA8

0.999

NDUFA2

0.999

NDUFB4

0.998

NDUFB6

0.998

PALB2

0.998

NDUFB8

0.998

NDUFA12

0.998

NDUFB5

0.998

NDUFS4

0.998

Your Current Organism:

Athene cunicularia

NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACUP00000000064	NDUFA12	ENSACUP00000000064	ENSACUP00000012492	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	0.998
ENSACUP00000000064	NDUFA2	ENSACUP00000000064	ENSACUP00000018122	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2.	0.999
ENSACUP00000000064	NDUFA6	ENSACUP00000000064	ENSACUP00000014342	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6.	0.999
ENSACUP00000000064	NDUFA8	ENSACUP00000000064	ENSACUP00000016722	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	0.999
ENSACUP00000000064	NDUFB4	ENSACUP00000000064	ENSACUP00000001542	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 4.	0.998
ENSACUP00000000064	NDUFB5	ENSACUP00000000064	ENSACUP00000013273	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial.	0.998
ENSACUP00000000064	NDUFB6	ENSACUP00000000064	ENSACUP00000002196	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6.	0.998
ENSACUP00000000064	NDUFB8	ENSACUP00000000064	ENSACUP00000003402	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial.	0.998
ENSACUP00000000064	NDUFS4	ENSACUP00000000064	ENSACUP00000019656	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.	0.998
ENSACUP00000000064	PALB2	ENSACUP00000000064	ENSACUP00000003225	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	Partner and localizer of BRCA2.	0.998
NDUFA12	ENSACUP00000000064	ENSACUP00000012492	ENSACUP00000000064	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase [ubiquinone] 1 subunit C2-like.	0.998
NDUFA12	NDUFA2	ENSACUP00000012492	ENSACUP00000018122	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2.	0.999
NDUFA12	NDUFA6	ENSACUP00000012492	ENSACUP00000014342	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6.	0.999
NDUFA12	NDUFA8	ENSACUP00000012492	ENSACUP00000016722	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.	0.999
NDUFA12	NDUFB4	ENSACUP00000012492	ENSACUP00000001542	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 4.	0.999
NDUFA12	NDUFB5	ENSACUP00000012492	ENSACUP00000013273	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial.	0.999
NDUFA12	NDUFB6	ENSACUP00000012492	ENSACUP00000002196	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6.	0.999
NDUFA12	NDUFB8	ENSACUP00000012492	ENSACUP00000003402	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial.	0.999
NDUFA12	NDUFS4	ENSACUP00000012492	ENSACUP00000019656	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.	0.999
NDUFA12	PALB2	ENSACUP00000012492	ENSACUP00000003225	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.	Partner and localizer of BRCA2.	0.998