DENND2C protein (Athene cunicularia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DENND2C

DENN domain-containing protein 2C-like isoform X1. (931 aa)

Predicted Functional Partners:

RAB35

0.615

IFT27

0.615

C3orf67

0.538

RHOBTB3

0.538

RAB9B

0.515

RAB9A

0.515

Your Current Organism:

Athene cunicularia

NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3orf67	DENND2C	ENSACUP00000003737	ENSACUP00000000419	Uncharacterized protein C3orf67 homolog isoform X1.	DENN domain-containing protein 2C-like isoform X1.	0.538
DENND2C	C3orf67	ENSACUP00000000419	ENSACUP00000003737	DENN domain-containing protein 2C-like isoform X1.	Uncharacterized protein C3orf67 homolog isoform X1.	0.538
DENND2C	IFT27	ENSACUP00000000419	ENSACUP00000011757	DENN domain-containing protein 2C-like isoform X1.	Intraflagellar transport protein 27 homolog.	0.615
DENND2C	RAB35	ENSACUP00000000419	ENSACUP00000006028	DENN domain-containing protein 2C-like isoform X1.	Ras-related protein Rab-35.	0.615
DENND2C	RAB9A	ENSACUP00000000419	ENSACUP00000007049	DENN domain-containing protein 2C-like isoform X1.	Ras-related protein Rab-9A.	0.515
DENND2C	RAB9B	ENSACUP00000000419	ENSACUP00000006472	DENN domain-containing protein 2C-like isoform X1.	Ras-related protein Rab-9B.	0.515
DENND2C	RHOBTB3	ENSACUP00000000419	ENSACUP00000020782	DENN domain-containing protein 2C-like isoform X1.	Rho-related BTB domain-containing protein 3 isoform X1.	0.538
IFT27	DENND2C	ENSACUP00000011757	ENSACUP00000000419	Intraflagellar transport protein 27 homolog.	DENN domain-containing protein 2C-like isoform X1.	0.615
RAB35	DENND2C	ENSACUP00000006028	ENSACUP00000000419	Ras-related protein Rab-35.	DENN domain-containing protein 2C-like isoform X1.	0.615
RAB9A	DENND2C	ENSACUP00000007049	ENSACUP00000000419	Ras-related protein Rab-9A.	DENN domain-containing protein 2C-like isoform X1.	0.515
RAB9A	RAB9B	ENSACUP00000007049	ENSACUP00000006472	Ras-related protein Rab-9A.	Ras-related protein Rab-9B.	0.901
RAB9A	RHOBTB3	ENSACUP00000007049	ENSACUP00000020782	Ras-related protein Rab-9A.	Rho-related BTB domain-containing protein 3 isoform X1.	0.503
RAB9B	DENND2C	ENSACUP00000006472	ENSACUP00000000419	Ras-related protein Rab-9B.	DENN domain-containing protein 2C-like isoform X1.	0.515
RAB9B	RAB9A	ENSACUP00000006472	ENSACUP00000007049	Ras-related protein Rab-9B.	Ras-related protein Rab-9A.	0.901
RAB9B	RHOBTB3	ENSACUP00000006472	ENSACUP00000020782	Ras-related protein Rab-9B.	Rho-related BTB domain-containing protein 3 isoform X1.	0.503
RHOBTB3	DENND2C	ENSACUP00000020782	ENSACUP00000000419	Rho-related BTB domain-containing protein 3 isoform X1.	DENN domain-containing protein 2C-like isoform X1.	0.538
RHOBTB3	RAB9A	ENSACUP00000020782	ENSACUP00000007049	Rho-related BTB domain-containing protein 3 isoform X1.	Ras-related protein Rab-9A.	0.503
RHOBTB3	RAB9B	ENSACUP00000020782	ENSACUP00000006472	Rho-related BTB domain-containing protein 3 isoform X1.	Ras-related protein Rab-9B.	0.503