STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOGMyogenic factor 4 (myogenin). (227 aa)    
Predicted Functional Partners:
MEF2D
MADS-box transcription enhancer factor 2D.
    
 0.789
MYMK
Protein myomaker.
   
  
 0.698
TCF12
Transcription factor 12 isoform X1.
   
 0.663
TCF3
Transcription factor 3.
   
 0.663
TCF4
Transcription factor 4.
   
 0.663
MEF2C
Myocyte-specific enhancer factor 2C isoform X1.
    
 0.620
MEF2A
Myocyte enhancer factor 2A.
    
 0.614
MYOD1
Myoblast determination protein 1.
  
 
0.594
MAPK12
Mitogen-activated protein kinase 12.
    
 0.594
SRF
Serum response factor isoform X1.
   
 
 0.567
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.