STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCHL5LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase isozyme L5. (276 aa)    
Predicted Functional Partners:
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
    
 0.966
PSMD14
26S proteasome non-ATPase regulatory subunit 14.
   
 0.961
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.949
ADRM1
26S proteasome regulatory subunit N13.
   
 0.948
PSMC5
26S proteasome regulatory subunit T6.
   
 0.947
PSMD4
26S proteasome non-ATPase regulatory subunit 4.
    
 0.947
PSMC6
26S proteasome regulatory subunit 10B.
   
 0.946
PSMD2
26S proteasome non-ATPase regulatory subunit 2.
   
 0.930
PSMA1
Proteasome subunit alpha type-1.
   
 0.924
BARD1
BRCA1-associated RING domain protein 1 isoform X1.
    
 0.921
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.