STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSX1LOW QUALITY PROTEIN: homeobox protein MSX-1. (122 aa)    
Predicted Functional Partners:
E2F4
E2F transcription factor 4.
   
  
 0.540
UBTF
Nucleolar transcription factor 1 isoform X1.
    
 
 0.539
CSRNP1
Cysteine/serine-rich nuclear protein 1.
      
 0.538
BMP2
Bone morphogenetic protein 2.
      
 0.538
MSX2
Homeobox protein MSX-2.
  
 
0.503
TGFB3
Transforming growth factor beta-3 proprotein.
      
 0.469
FGF8
Fibroblast growth factor 8.
      
 0.469
CHRD
Chordin.
      
 0.440
GDF7
Growth differentiation factor 7.
      
 0.412
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.