PRKAR2B protein (Athene cunicularia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PRKAR2B

CAMP-dependent protein kinase type II-beta regulatory subunit isoform X1. (256 aa)

Predicted Functional Partners:

PRKACB

0.930

PRKX

0.827

THAP1

0.769

AKAP10

0.750

PRKAR2A

0.745

PRKAR1A

0.734

AKAP1

0.638

SGK2

0.618

RSPH3

0.606

RPS6KB1

0.562

Your Current Organism:

Athene cunicularia

NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP1	AKAP10	ENSACUP00000008249	ENSACUP00000010183	A-kinase anchor protein 1, mitochondrial.	A-kinase anchor protein 10, mitochondrial isoform X1.	0.479
AKAP1	PRKACB	ENSACUP00000008249	ENSACUP00000010381	A-kinase anchor protein 1, mitochondrial.	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	0.863
AKAP1	PRKAR1A	ENSACUP00000008249	ENSACUP00000007230	A-kinase anchor protein 1, mitochondrial.	CAMP-dependent protein kinase type I-alpha regulatory subunit.	0.638
AKAP1	PRKAR2A	ENSACUP00000008249	ENSACUP00000003693	A-kinase anchor protein 1, mitochondrial.	CAMP-dependent protein kinase type II-alpha regulatory subunit.	0.638
AKAP1	PRKAR2B	ENSACUP00000008249	ENSACUP00000001906	A-kinase anchor protein 1, mitochondrial.	CAMP-dependent protein kinase type II-beta regulatory subunit isoform X1.	0.638
AKAP1	PRKX	ENSACUP00000008249	ENSACUP00000006424	A-kinase anchor protein 1, mitochondrial.	CAMP-dependent protein kinase catalytic subunit PRKX.	0.771
AKAP1	THAP1	ENSACUP00000008249	ENSACUP00000022292	A-kinase anchor protein 1, mitochondrial.	THAP domain-containing protein 1/3.	0.682
AKAP10	AKAP1	ENSACUP00000010183	ENSACUP00000008249	A-kinase anchor protein 10, mitochondrial isoform X1.	A-kinase anchor protein 1, mitochondrial.	0.479
AKAP10	PRKACB	ENSACUP00000010183	ENSACUP00000010381	A-kinase anchor protein 10, mitochondrial isoform X1.	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	0.687
AKAP10	PRKAR1A	ENSACUP00000010183	ENSACUP00000007230	A-kinase anchor protein 10, mitochondrial isoform X1.	CAMP-dependent protein kinase type I-alpha regulatory subunit.	0.750
AKAP10	PRKAR2A	ENSACUP00000010183	ENSACUP00000003693	A-kinase anchor protein 10, mitochondrial isoform X1.	CAMP-dependent protein kinase type II-alpha regulatory subunit.	0.750
AKAP10	PRKAR2B	ENSACUP00000010183	ENSACUP00000001906	A-kinase anchor protein 10, mitochondrial isoform X1.	CAMP-dependent protein kinase type II-beta regulatory subunit isoform X1.	0.750
AKAP10	PRKX	ENSACUP00000010183	ENSACUP00000006424	A-kinase anchor protein 10, mitochondrial isoform X1.	CAMP-dependent protein kinase catalytic subunit PRKX.	0.687
AKAP10	THAP1	ENSACUP00000010183	ENSACUP00000022292	A-kinase anchor protein 10, mitochondrial isoform X1.	THAP domain-containing protein 1/3.	0.646
PRKACB	AKAP1	ENSACUP00000010381	ENSACUP00000008249	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	A-kinase anchor protein 1, mitochondrial.	0.863
PRKACB	AKAP10	ENSACUP00000010381	ENSACUP00000010183	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	A-kinase anchor protein 10, mitochondrial isoform X1.	0.687
PRKACB	PRKAR1A	ENSACUP00000010381	ENSACUP00000007230	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	CAMP-dependent protein kinase type I-alpha regulatory subunit.	0.890
PRKACB	PRKAR2A	ENSACUP00000010381	ENSACUP00000003693	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	CAMP-dependent protein kinase type II-alpha regulatory subunit.	0.958
PRKACB	PRKAR2B	ENSACUP00000010381	ENSACUP00000001906	CAMP-dependent protein kinase catalytic subunit beta isoform X1.	CAMP-dependent protein kinase type II-beta regulatory subunit isoform X1.	0.930
PRKAR1A	AKAP1	ENSACUP00000007230	ENSACUP00000008249	CAMP-dependent protein kinase type I-alpha regulatory subunit.	A-kinase anchor protein 1, mitochondrial.	0.638