STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTX2Homeobox protein OTX2. (248 aa)    
Predicted Functional Partners:
ZNF366
Zinc finger protein 366.
    
 
 0.664
ENSACUP00000008437
annotation not available
   
  
 0.661
RORB
RAR-related orphan receptor beta.
    
 
 0.562
PVALB
Parvalbumin alpha.
   
  
 0.559
GLIS1
Zinc finger protein GLIS1/3.
    
 
 0.549
GATA4
Transcription factor GATA-4 isoform X1.
   
 
 0.547
CHRD
Chordin.
    
 
 0.543
GAD1
Glutamate decarboxylase 1 isoform X1.
      
 0.540
FGF5
Fibroblast growth factor 5.
    
 
 0.540
BDNF
Brain-derived neurotrophic factor.
      
 0.539
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.