STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDKMidkine. (155 aa)    
Predicted Functional Partners:
PTPRZ1
Receptor-type tyrosine-protein phosphatase zeta.
    
 0.678
PTN
Pleiotrophin.
    
0.674
ENSACUP00000001462
annotation not available
    
 0.652
LTK
Leukocyte tyrosine kinase receptor isoform X1.
    
 0.652
ENSACUP00000011654
annotation not available
    
 0.647
MET
Hepatocyte growth factor receptor isoform X1.
    
 0.647
ROS1
Proto-oncogene tyrosine-protein kinase ROS.
    
 0.622
NCL
Nucleolin.
    
 
 0.542
EMC3
ER membrane protein complex subunit 3.
      
 0.505
ENSACUP00000002711
annotation not available
     
 0.421
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.