STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEO1RNA polymerase-associated protein LEO1. (611 aa)    
Predicted Functional Partners:
CDC73
Parafibromin.
   
 0.998
RTF1
RNA polymerase-associated protein RTF1 homolog isoform X1.
   
 0.998
CINP
Cyclin-dependent kinase 2-interacting protein.
   
 0.998
ENSACUP00000008832
annotation not available
   
 0.998
CTR9
RNA polymerase-associated protein CTR9 homolog.
   
 0.998
SUPT6H
Transcription elongation factor SPT6.
   
 0.998
SUPT4H1
Transcription elongation factor SPT4.
    
 0.998
SUPT5H
Transcription elongation factor SPT5.
   
 0.998
WDR61
WD repeat-containing protein 61.
   
 0.994
SRBD1
S1 RNA-binding domain-containing protein 1.
   
 0.987
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.