STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1 isoform X1. (1300 aa)    
Predicted Functional Partners:
BECN1
Beclin-1.
    
 0.991
ULK1
Serine/threonine-protein kinase ULK1 isoform X1.
   
 0.973
TRAF6
TNF receptor-associated factor 6.
    
 0.968
ULK2
Serine/threonine-protein kinase ULK2.
   
 0.968
DDB1
DNA damage-binding protein 1.
    
 0.945
PRKN
E3 ubiquitin-protein ligase parkin.
    
 0.942
DDA1
DET1- and DDB1-associated protein 1.
    
 0.927
DCAF1
DDB1- and CUL4-associated factor 1 isoform X1.
   
 
  0.875
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.873
DCAF5
DDB1- and CUL4-associated factor 5.
   
  0.858
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.