STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLR1D-2Protein POLR1D. (150 aa)    
Predicted Functional Partners:
APAF1
Apoptotic protease-activating factor 1 isoform X1.
   
 0.755
ARID4A
AT-rich interactive domain-containing protein 4A.
    
 0.710
ARID4B
AT-rich interactive domain-containing protein 4B.
    
 0.710
FANCM
FA complementation group M.
    
 0.702
ENSACUP00000019810
annotation not available
   
 0.570
UBXN7
UBX domain-containing protein 7.
   
 
 0.548
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.516
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
    
 0.516
NDUFA8
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.
   
 0.505
DDX20
Probable ATP-dependent RNA helicase DDX20.
   
 0.484
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.