STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFFBDNA fragmentation factor subunit beta. (316 aa)    
Predicted Functional Partners:
DFFA
DNA fragmentation factor subunit alpha.
    
 0.987
H1-0
LOW QUALITY PROTEIN: histone H5.
    
 0.750
CASP3
Caspase 3.
    
 0.741
LOC113490234
Caspase-3-like.
    
 0.741
CIDEA
Cell death activator CIDE-A.
    
 0.648
CFLAR
CASP8 and FADD-like apoptosis regulator isoform X1.
    
 0.601
CENPU
Centromere protein U.
    
 0.598
CASP7
Caspase-7 isoform X1.
    
 0.598
CASP6
Caspase 6.
    
 0.593
HP1BP3
Heterochromatin protein 1-binding protein 3 isoform X1.
    
 0.568
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.