STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAMBPL1AMSH-like protease. (417 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.914
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.881
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
   
 0.880
STAM2
Signal transducing adapter molecule 2.
    
 0.862
STAM
Signal transducing adapter molecule 1.
    
 0.849
PSMD6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.823
PSMD13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.823
PSMD12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.822
PSMD3
Proteasome 26S subunit, non-ATPase 3.
   
 0.803
PSMD11
26S proteasome non-ATPase regulatory subunit 11.
   
 0.803
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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