STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPERibulose-phosphate 3-epimerase. (160 aa)    
Predicted Functional Partners:
TKT
Transketolase.
  
 0.996
RPIA
Ribose 5-phosphate isomerase A.
  
 0.996
PGD
6-phosphogluconate dehydrogenase, decarboxylating.
   
 0.990
TALDO1
Transaldolase.
  
 0.952
H6PD
GDH/6PGL endoplasmic bifunctional protein.
  
 
 0.905
RBM45
RNA-binding protein 45.
   
 0.905
EIF3D
Eukaryotic translation initiation factor 3 subunit D isoform X1.
 
 
    0.876
PDHB
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
     
 0.861
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1.
     
 0.861
IDNK
Probable gluconokinase.
     
 0.801
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.