STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1AProtein phosphatase 1A isoform X1. (382 aa)    
Predicted Functional Partners:
MAP2K6
Dual specificity mitogen-activated protein kinase kinase 6.
    
  0.910
MAP2K3
Dual specificity mitogen-activated protein kinase kinase 3 isoform X1.
    
  0.910
SMAD4
Mothers against decapentaplegic homolog 4.
    
 0.643
SLC3A1
Solute carrier family 3 (neutral and basic amino acid transporter), member 1.
 
 
  
 0.602
PPM1B
Protein phosphatase 1B isoform X1.
  
  
0.578
LOC113490990
Casein kinase 1, epsilon.
   
 
 0.571
SMAD3
Mothers against decapentaplegic homolog 3.
   
 0.565
SMAD2
Mothers against decapentaplegic homolog 2 isoform X1.
   
 0.565
ZDHHC1
Zinc finger DHHC-type containing 1.
    
 
 0.556
UBB
Polyubiquitin-B isoform X1.
   
 0.546
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.