STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZZeta-sarcoglycan. (300 aa)    
Predicted Functional Partners:
SGCE
Epsilon-sarcoglycan isoform X1.
   
 0.857
SSPN
Sarcospan isoform X1.
   
 0.856
DAG1
Dystroglycan 1.
    
 0.830
SGCB
Beta-sarcoglycan.
   
 0.829
SGCG
Gamma-sarcoglycan isoform X1.
  
 
0.827
SGCD
Delta-sarcoglycan isoform X1.
  
  
 
0.714
NOS1AP
LOW QUALITY PROTEIN: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein.
     
 0.631
LOC113486578
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like.
     
 0.631
ENSACUP00000012702
T-cell immunoglobulin and mucin domain-containing protein 4-like.
      
 0.530
SNTA1
Syntrophin alpha 1.
     
 0.514
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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