STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS35Vacuolar protein sorting-associated protein 35. (767 aa)    
Predicted Functional Partners:
VPS26A
Vacuolar protein sorting-associated protein 26A isoform X1.
   
 0.998
VPS29
Vacuolar protein sorting-associated protein 29.
   
 0.996
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 0.992
SNX1
Sorting nexin-1/2.
   
 0.987
SNX2
Sorting nexin-1/2.
   
 0.987
ENSACUP00000009258
Vacuolar protein sorting-associated protein 29-like.
   
 0.967
SNX3
Sorting nexin-3/12.
   
 0.960
SNX12
Sorting nexin-3/12.
   
 0.960
SNX8
Sorting nexin-8 isoform X1.
   
 0.958
TBC1D5
TBC1 domain family member 5.
   
 0.955
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.