STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF128E3 ubiquitin-protein ligase RNF128. (291 aa)    
Predicted Functional Partners:
USP8
Ubiquitin carboxyl-terminal hydrolase 8 isoform X1.
    
 0.681
S100Z
Protein S100-Z.
      
 0.642
RNF150
RING finger protein 150 isoform X1.
  
0.569
ENSACUP00000007260
annotation not available
 
 
 0.542
RCN1
Reticulocalbin-1.
      
 0.538
KCNV2
Potassium voltage-gated channel subfamily V member 2.
    
 
 0.538
ENSACUP00000004753
annotation not available
    
 0.537
VIP
Vasoactive intestinal peptide.
      
 0.537
RNF13
E3 ubiquitin-protein ligase RNF13.
      
0.531
NDUFAF6
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1.
      
 0.529
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.