STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARIH1E3 ubiquitin-protein ligase ARIH1. (463 aa)    
Predicted Functional Partners:
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.980
CUL3
LOW QUALITY PROTEIN: cullin-3.
   
 0.961
CUL1
Cullin 1.
   
 0.900
UBE2L3
Ubiquitin-conjugating enzyme E2 L3.
    
 0.895
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.895
TNFAIP1
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2.
    
 0.888
ASB4
Ankyrin repeat and SOCS box protein 4.
    
 0.862
KLHL7
Kelch-like protein 7.
   
  0.862
CUL2
Cullin-2 isoform X1.
    
 0.861
KLHL22
Kelch-like protein 22 isoform X1.
   
 0.860
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.