STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX4T-box transcription factor TBX4. (456 aa)    
Predicted Functional Partners:
YAP1
Transcriptional coactivator YAP1.
    
 0.691
WWTR1
WW domain-containing transcription regulator protein 1.
    
 0.691
PROM1
Prominin-1 isoform X1.
      
 0.660
FGFBP1
Fibroblast growth factor-binding protein 1 isoform X1.
      
 0.636
CTNNB1
Catenin beta-1 isoform X1.
    
 0.583
TBXT
T-box transcription factor T.
 
      0.564
HOXB9
Homeobox B9.
    
 
 0.552
TBL1X
F-box-like/WD repeat-containing protein TBL1X.
    
 
 0.532
BDNF
Brain-derived neurotrophic factor.
      
 0.532
TBL1XR1
F-box-like/WD repeat-containing protein TBL1XR1 isoform X1.
    
 
 0.532
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.