STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23AProtein transport protein Sec23A. (765 aa)    
Predicted Functional Partners:
SEC13
Protein transport protein SEC13.
   
 0.996
SEC31A
Protein transport protein Sec31A isoform X1.
   
 0.989
SEC24A
Protein transport protein Sec24A.
   
0.958
SEC24C
Protein transport protein Sec24C isoform X1.
   
0.950
SEC24D
Protein transport protein Sec24D isoform X1.
   
0.947
SEC24B
Protein transport protein Sec24B isoform X1.
   
0.946
SEC16B
SEC16 homolog B, endoplasmic reticulum export factor.
   
 0.943
RPL12
Ribosomal protein L12.
 
      0.899
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.897
SEC22B
Vesicle-trafficking protein SEC22b.
   
 0.891
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.