STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFD1Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1. (302 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.998
VCP
Transitional endoplasmic reticulum ATPase.
    
 0.997
NPLOC4
Nuclear protein localization protein 4 homolog.
   
 0.996
FAF1
FAS-associated factor 1.
    
 0.995
FAF2
FAS-associated factor 2.
    
 0.993
PLAA
Phospholipase A-2-activating protein isoform X1.
   
 
 0.984
DERL1
Derlin-1.
   
 0.977
FAAP100
Fanconi anemia core complex-associated protein 100.
   
 0.966
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
   
 0.961
AMFR
E3 ubiquitin-protein ligase AMFR isoform X1.
   
 0.960
Your Current Organism:
Athene cunicularia
NCBI taxonomy Id: 194338
Other names: A. cunicularia, Speotyto cunicularia, burrowing owl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.